Outline (Day 1 - Nov 15) • Introduction to Cancer Genomics Data Cancer Genomics Data portals

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•Introduction*to*Cancer*Genomics*Data
•Cancer*Genomics*Data*portals
•The*cBioPortal for*cancer*genomics*
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•Journal*Club
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•Cancer*Genomics*Data*portals*for*tumor*models
•The*CCLP*data*portal
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•Basic*understanding*of*RNA-Seq data*processing.
•Dimensionality*reduction.
•Differential*expression.
•Introduction*to*single-cell*RNA-Seq

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•Immune*signatures*in*gene*expression*data.
•Prediction*of*immune*cell*fractions.
•Prediction*of*peptide-HLA*interactions*applied*to*neo-antigens

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